philosopher

philosopher copied to clipboard

ProteinProphet Error

14

I am trying to run philosopher pipeline, but it stopped at the ProteinProphet step with an error ``` shell-init: error retrieving current directory: getcwd: cannot access parent directories: No such...

uonnet

Adjust `I` and `L` in the psm.tsv, peptide.tsv, and ion.tsv after razor assignment

11

The razor assignment might make an alternative protein as the razor protein. Since we don't distinguish `I` and `L` in the protein mapping, some peptides might not exist in their...

fcyu