Ma'ayan Lab

icon indicating a website link http://icahn.mssm.edu/labs/maayan

icon location New York City, NY icon location Developing Computational Methods to Study the Complexity of Regulatory Networks in Mammalian Cells

Results 9 repositories owned by Ma'ayan Lab

clustergrammer

231
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An interactive heatmap visualization built using D3.js

verified publisher icon MaayanLab

biojupies

105
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29
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Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.

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Zika-RNAseq-Pipeline

101
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An open RNA-Seq data analysis pipeline tutorial with an example of reprocessing data from a recent Zika virus study

verified publisher icon MaayanLab

appyter

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jinja2-enabled jupyter notebooks

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appyter-catalog

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A catalog of appyter notebooks

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archs4

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ARCHS4 RNA-seq processing scripts and web server pages.

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biojupies-plugins

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User-submitted RNA-seq data analysis tools for BioJupies.

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blitzgsea

32
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Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for accurate p-value estimation.

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clustergrammer-widget

47
Stars
27
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The Clustergrammer interactive Jupyter notebook widget

verified publisher icon MaayanLab