kourami

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Hi, I am thinking about assembling MHC-I of some other non-human species using Kourami. And I prepared the input bam file and the reference directory following the guideline for Human...

yuanfeng719

Null Pointer on Kourami call

3

I am getting a Null Pointer error while running Kourami on a custom built IMGT HLA alignments version 3.37.0 and using 1000 genomes NA12878 GRCh38 aligned bam file. I went...

j2moreno

Running Kourami with non human MHC

3

Is there a chance to run Kourami with my own list of non human MHC alleles?

drtamermansour

Hi, I tried Kourami for HLA typing recently, the tool itself and the preprocessing script run fine on my sample (aligned on Hg38 + decoy + HLA + no ALT)....

NTNguyen13

Added Dockerfile that installs all necessary dependencies so the users could easily run the tool.

vladimirkovacevic