sequence-search topic

List sequence-search repositories

MMseqs2

1.3k
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MMseqs2: ultra fast and sensitive search and clustering suite

hh-suite

507
Stars
128
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Remote protein homology detection suite.

muscle

192
Stars
22
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Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and pre...

MMseqs2-App

57
Stars
19
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MMseqs2 app to run on your workstation or servers

kourami

35
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12
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Kourami: Graph-guided assembly for HLA alleles