Jacques Dainat
Have you checked the help? https://nbisweden.github.io/AGAT/tools/agat_sp_extract_sequences/#briefly-in-pictures I guess the --split is useless. Then if you want to extract everything from the start of the gene to the end of (So...
One line of your file contain only the value/character `}` Either a line contain 9 tabulated column or start by `#` and contains what ever you want. You are not...
Hi, What script provided this error?
I think it has been resolved in v1.4.1
This is an ongoing work. It is almost done but I’m missing time to polish this work. Make me this that I did not push the branch remotely… I hope...
You should be able to achieve this using agat_sp_filter_gene_by_intron_numbers.pl
I would say this one is ready but the parallelisation offer a limited acceleration (Perl is not ideal). It helps only for huge data, due to the fact that we...
Good idea. Let me do a last major release then we could use Projects feature to plan future implementations. For RAM and IO limitation I have seen another type of...
Woohoo excellent work @kim-fehl ! I’m a bit annoyed because I made substantial work and refactoring in a parallel version of AGAT since a year that I was close to...
I'm tearing my hair out trying to merge this into the parallel branch... Currently I'm a bit septic how to find a solution for the Unify CLI you suggest as...