Hannes Stärk

Results 7 repositories owned by Hannes Stärk

EquiBind

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EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein

3DInfomax

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Making self-supervised learning work on molecules by using their 3D geometry to pre-train GNNs. Implemented in DGL and Pytorch Geometric.

protein-localization

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Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of proteins :microscope:

SMPL-NeRF

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Embed human pose information into neural radiance fields (NeRF) to render images of humans in desired poses :running: from novel views

gnn-reinforcement-learning

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Representing robots as graphs for reinforcement-learning in PyBullet locomotion environments.

FlowSite

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Implementation of FlowSite and HarmonicFlow from the paper "Harmonic Self-Conditioned Flow Matching for Multi-Ligand Docking and Binding Site Design"