Richard Harris

Results 239 comments of Richard Harris

Thanks for the additional information @sklages and @GabeAl, this issue continues to be under investigation. Best regards, Rich

Hi @me-nobody, I'm not familiar with apptainer but you might be missing some settings to expose your GPU hardware to dorado within the singularity container based on these [docs](https://apptainer.org/docs/user/1.0/gpu.html#gpu-support-nvidia-cuda-amd-rocm). Kind...

@lpryszcz Please create a new ticket and complete the template so that we have all the context we need to help with your issue

Hi @yplee614, yes as @kubek78 said and shared from the docs there is a very high resource requirement to run dorado correct. @shelkmike, changes in dorado 0.7.3 resulted an increase...

@KeygeneICT, thanks for the information. Approximately what depth is your input data? Kind regards, Rich

@KeygeneICT, Could you try [dorado-0.8.0](https://github.com/nanoporetech/dorado/releases/tag/v0.8.0) which has a number of stability improvements to dorado correct? Thanks to all for their suggestions on reducing VRAM, there's also been updates to the...

I'll add it to the list of enhancements, thanks @sklages

A similar issue for GH200 support is being tracked here: https://github.com/nanoporetech/dorado/issues/637 Work is ongoing for this issue. We've removed the main progress blocker as of v1.0.0 but some more work...

This option has been removed from dorado correct in 0.7.3, it will be added again when the feature is available.

I'll bring this up, we'll discuss this change and I'll get back to you. Thanks, Rich