Siddhesh Thakur

Results 16 comments of Siddhesh Thakur

I just fixed it for myself and created a pull request.

Hey @seva100 I am facing a similar issue in this particular line `h5f = h5py.File("../data/hdf5_datasets/all_data.hdf5", "r+")` I cant find this particular dataset at all. not even in the folder you...

@seva100 Hey, Can you explain how to create a union of all the datasets?

There should be a check since this will not work for 3D, right?

> > There should be a check since this will not work for 3D, right? > > Ha ha, yeah, I missed the `remove` after 2D test. smile I meant...

Does it make sense to add it in currently in the latest release to look good at least?

> @Geeks-Sid Can you send me all the parameters used for isort, if any were non-default? I'm looking into doing this from Black. Just used the defaults for solving imports.

Some metrics such as F1-score or AUROC are not mathematically linear in nature, which means over a given epoch, the average metric that is calculated by averaging the metric by...

Have you passed the images through these steps https://github.com/CBICA/BrainMaGe/#steps-to-run-application? For the multi-modality segmentation, the images do need to pass through these steps. However, we do suggest using 'brain_mage_single_run' when possible.