Eelco
Eelco
Description Currently, there is no pre-processing of the sequencing files and we would like to add this. There is a [paper](https://www.biorxiv.org/content/10.1101/2024.08.18.608522v1.full) that describes a lncRNA pipeline that includes pre-processing that...
Clean up the Identify_novel_lncRNA_with_criterions process from the old DSL1 pipeline which can be found [here](https://github.com/nf-core/lncpipe/blob/dev_dsl1/main.nf). This process can for example use multiple modules like [gffread](https://github.com/nf-core/modules/tree/master/modules/nf-core/gffread). There might be some tools...
modules.json keeps track of all modules and subworkflows used from [nf-core/modules](https://github.com/nf-core/modules). Reference: - [rnaseq/modules.json](https://github.com/nf-core/rnaseq/blob/3.18.0/modules.json)
**Description** As lncpipe.nf is the main script everyone will be dumping their modules in, this needs to be managed. This role will take responsibility of supporting people to add the...