goci
goci copied to clipboard
EBISPOT
GWAS Catalog Ontology and Curation Infrastructure
MVP data: [MVP](https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs002453.v1.p1) is an ongoing prospective cohort study and mega‐biobank in the Department of Veterans Affairs Healthcare System designed to study genetic influences on health and disease among veterans....
This is high priority, as it is needed to submit summary statistics requested by Open Targets.
**Empty yaml file types** Found 785 yamls with empty file types - GCSTs listed in attached .txt file: [yamls-with-empty-filetypes.txt](https://api.zenhub.com/attachedFiles/eyJfcmFpbHMiOnsibWVzc2FnZSI6IkJBaHBBejdJQmc9PSIsImV4cCI6bnVsbCwicHVyIjoiYmxvYl9pZCJ9fQ==--3a426c587066d2800d68dfb3a2395248a1be10b1/yamls-with-empty-filetypes.txt) (Unfortunately these are not all GWAS-SSF so file headers would need...
Currently as part of Daat release whenever the Solr indexing fails in between , we have to manually trigger nextflow resume command , this is not very efficient we lose...
There is an error coming in the obsolete EFO report for EFO_0003761, which was deprecated with replacement in EFO Please find out what the error is and whether any action...
The sumstats for GCST009324 need to be re-harmonised due to a formatting error in the original GCST009324.tsv file. I have replaced the GCST009324.tsv file to GCST009324.tsv.gz on both staging and...
Some searches are spinning forever in the search UI, including ACE2 (gene) and schizophrenia (trait), also the generic search that displays the 20 most recent publications. > The issue with...
This issue was raised by a user query. Some studies in this publication have harmonised files, e.g. http://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/GCST90200001-GCST90201000/GCST90200266/ But others do not, e.g. http://ftp.ebi.ac.uk/pub/databases/gwas/summary_statistics/GCST90200001-GCST90201000/GCST90200267/ I can't see any obvious reason...
I need to correct the name of this Reported Trait in depocuration (https://www.ebi.ac.uk/gwas/depo-curation/reported-traits). But when I tried to edit the name, I get the following message: `An unexpected error occurred.`...
A user wanted an explanation of how the variants are mapped. They are particularly interested in this variant, rs6011066, which is mapped to gene ZGPAT in UI. But the link...
