Data Release : Make Solr Indexer handle nextflow resume on failure

[sajo-ebi]

Currently as part of Daat release whenever the Solr indexing fails in between , we have to manually trigger nextflow resume command , this is not very efficient we lose lot of productivity especially when DR fails in non working hours or weekends . We need to handle the resume command in Python caller of the nextflow . The nexflow is calling using the below method

indexer-manager --newInstance spotrel --oldInstance spotpub --solrHost http://gwas-garfield --solrCore gwas --solrPort 8983 --wrapperScript /hps/software/users/parkinso/spot/gwas/prod/sw/solr-indexer/new_solr_wrapper.sh --logFolder /hps/nobackup/parkinso/spot/gwas/logs/solr_indexing --fullIndex