DaRinker

Same experience here. Moreover, if I supply the same input PDB structure to both the DeepFRI server and my local install of DeepFRI (using supplied trained models) I get back...

Thanks for weighing in. While that sounds plausible, should the differences be drastic or subtle? For example, the disparity I'm noticing looks like this: **Website** >Structure-Based Molecular Function - GO...

Basically I want to incorporate DeepFRI into an structure-based, gene annotation pipeline. However, without any confidence that it will be supported in future, I'm nervous about investing the effort...

I just checked my output directories. This phenomena is NOT present in the predict_results outputs but it IS present in all the annotate outputs (_results and _misc). I can trace...

Yes, I did run funanotate update. (My ordered list of commands is above). I ran the same analysis over 16 genomes and they all show some of these odd ball...

What I'm hearing is that this is not intended behavior and that the missing padding is not meant to signify anything. If that's the correct I will go back an...

UPDATE: I re-ran my script (using whatever pre-existing output funannotate could find) and everything seemed to work just fine (??). ``` Starting singularity... Funannotate-prepped genome file found.. ########## Running command:...

> might be that the path loaded is diff when you run interactively vs direct? Interesting. I would have guessed that the same version would be used since both are...

As an update, this is still a problem for me. However, I have since discovered that I can also get the annotation to complete simply by resubmitting the _same_ _job_...

Thank you for @wlkath !!