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Is DeepFRI no longer being updated or supported?

Open DaRinker opened this issue 3 years ago • 3 comments

Am interested in using DeepFRI in a new pipeline I'm writing, but am concerned (based upon the number and age of unaddressed Issues here) that DeepFRI is no longer supported.

DaRinker avatar Sep 01 '22 20:09 DaRinker

I think it is working in general, with some minor issues with the structural representations in GCNs. Which parts are you most interested in, as I have been doing experiments with DeppFRI for some time?

anar-rzayev avatar Sep 14 '22 08:09 anar-rzayev

Basically I want to incorporate DeepFRI into an structure-based, gene annotation pipeline. However, without any confidence that it will be supported in future, I'm nervous about investing the effort...

DaRinker avatar Sep 14 '22 20:09 DaRinker

afaik the main developer is no longer actively involved in the project but we, as co-authors, plan on maintaining deepFRI independently. in fact, we already have a pipeline for gene annotation which you might find interesting: https://github.com/bioinf-mcb/metagenome_assembly future deepFRI releases would come from the BIOINF-MCB orgaznization

tkosciolek avatar Feb 20 '23 11:02 tkosciolek