Ryan Savill
Ryan Savill
Hello, I'm using vedo for a project of mine, where I have an optimization problem that requires finding a point on the intersection of a vedo mesh with a line....
Hey @haesleinhuepf, I was just reading @marabuuu's awesome blogpost about feature extraction and saw that you suggest using the correlation matrix implemented here. Recently I was using correlation matrices in...
Hello Everyone, It seems that the test are failing on all new PRs and I think I have found out where the errors are coming from and why some PRs...
This PR will address #209. Currently I have implemented it so that the features are also available in the dropdown for cluster ID and the colormap can be selected even...
Some more dimensionality reduction algorithms might be interesting for exploring other visualisations: - [ ] Diffusion maps: might be interesting since used in other developmental biology projects. Implementation [here](https://github.com/DiffusionMapsAcademics/pyDiffMap) with...
As a last step in the workflow it could be nice to have a widget which based on a clustering can tell you in which features the groups differentiate from...
This PR would close #84 by additionally checking for data frames. This behavior only arises if we add features to the surface layer by for instance setting the feature attribute...
When I use the show table widget on a surface layer which has the feature attribute set but not the properties attribute then the table widget sets the properties to...
Just a small issue: if I create a fresh environment and install devbio-napari and afterwards try to follow the instructions on how to install nppas it throws this error: ```...
Changed the dependencies to not rely on pinned numpy versions which are no longer supported by libraries like zarr. Thanks to @ziw-liu for bringing it up. Once merged this will...