Chi Liu
Chi Liu
Hi. Do you mean the loading? Please run `View(t1$res_ordination$loading)`.
Hi. It could come from the unrecognizable prefix. Two ways are available. 1. Use tidy the taxonomy to make the tax_table well organized with the prefix by using `tidy_taxonomy`. ```...
Hi. Do you mean the function does not work? Please show the full steps that I can judge whether it comes from extra issue. I guess it should be normal...
Hi. First you should assign back to `MicroEcoDataObject$tax_table` when using `tidy_taxonomy`. ``` MicroEcoDataObject$tax_table
Hi. The pdf cannot be opened. Maybe it is not better supported by the website. But according to my experience, this issue probably comes from different orders of mean and...
Hi, Spencer, Now, there is not an one-step function to do this. But I think it is not hard to do like the following steps show. ``` library(microeco) library(magrittr) data("dataset")...
Hi. Yes. Multiple taxonomic names are supported in the parameter add_taxa_name of cal_network function. ``` library(microeco) data(dataset) t1
Hi. Which network visualization way are you using? I am trying to map abundance to the node size and check the step.
Yes. I also find that current Gephi can not map the abundance to node size and color as continuous variable. It only support the abundance as discrete variable (maybe all...
Wow! Fantastic! I got it as you said. The software make all the input data as strings. I will write a note in the tutorial to make readers know how...