MolecularNodes

MolecularNodes copied to clipboard

Color atoms using external data

8

Hi, I would like to color the atoms from MolecularNodes based on numbers calculated externally, for example the coordination number of each atom. I can see that the "Color Map...

nilsholle

open files using molecular nodes

3

Hi Brady first of all thanks for the great work ! I installed Molecular Nodes on Kubuntu (22.10) with Blender 3.2 and Python3.10. I realized, that you cant import files...

jonbind

Falloff with MOL_Object_Effect

5

Hi Brady, I'm trying the MOL_object_effect to delete atoms with the delete geometry node. As object I put in a cube, because I want a rectilinear removal of the atoms...

SanderEwen

MDAnalysis unavailable error

49

I keep getting "Error: MDAnalysis Unavaiable" despite having MDanalysis installed. I just followed the instructions, and installed: - Blender 3.1.2 (ok) - Molecular Nodes 0.5.19 (ok), - Atomium (ok), -...

soviete

PDB stays as black points after importing. No nodes being created upfront.

5

Hi Brady, when I am importing a PDB and set up the Cycles render engine, the PDB file is displayed as black points. It seems that the nodes are not...

EnsTimm

Materials field in Mol_DNA_bases is empty

1

Hi, I think I am facing an issue with the Material field in the MOL_DNA_bases. The field on your video tutorial has something, but on my end, the field is...

ABanny

Lipophilic potential

6

Hi Brady, I am truly amazed and admired of your excellent work! I am trying to use MolNodes, but the logic of nodes is somehow counterintuitive, at least for my...

MonZop

pdb file doesn't import to M-Nodes

1

Hi Brady I am working with phospholipid bilayer it is downloaded from "http://www.fos.su.se/~sasha/SLipids/Downloads.html" in pdb format, when I am uploading it from my Desktop to M-Nodes it shows an error....

AlaaHuwaidi

Add support for Atom Indices Import

7

Add support for importing atom indices import from MD / topology files from programs such as MDAnalysis and mdtraj.

BradyAJohnston

MDAnalysis is not stable in blender

1

Every time opening blender have to be re-check MDAnalysis, it seems MDAnalysis not stable in blender MAC. Whoever when I re-check MDAnalysis it work fine.

AlaaHuwaidi