dmipy
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AthenaEPI
The open source toolbox for reproducible diffusion MRI-based microstructure estimation
Currently, the Watson and Bingham distributions are automatically parameterized using the ODI and beta_fraction parameters, but these are in fact optimization parameters just to facilitate optimization of the actual \kappa...
Currently, Dmipy can modularly generate most models proposed for PGSE-based microstructure imaging. However, the DIAMOND model by Sherrer et al. [1] is a bit particular in that it uses a...
https://github.com/AthenaEPI/dmipy/blob/3942f6e9c6b15372fd74ff6b9415125811bb080b/dmipy/version.py#L60 @rutgerfick I think that the dependencies are too lax. We need to add *everything* that the tool needs to import to run. Boto is just needed for the examples...
Hi, I’m @StefaniaOliviero and I'm a new user of DMIPY I’m interested in fitting some simulated signals created in Camino (generated in .Bfloat and converted in .nii). I'm loading the...
I previously (1-2 years back) installed and used dmipy. But now installing on a new computer gives errors. Has anyone recently installed dmipy? I copy the last lines of the...
Hi there, The numpy and scipy versions needed for DMIPY are incompatible for an M2 Mac - are there plans to update the numpy / scipy versions to later releases?
When trying to render the fiber orientation distributions with NODDI (or with CSD), the desktop environment crashes and needs to be restarted. The crash happens when using 'window.record' from the...
