dmipy
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AthenaEPI
The open source toolbox for reproducible diffusion MRI-based microstructure estimation
dti fit
the dipy dtifit is often called to fit the tensor and calculate the classical FA, AD and RD measures in various dmipy models. I would like to incorporate an anisotropic...
With this PR we add the skeleton for the implementation of [AMICO](https://github.com/daducci/amico). Let's open the discussion @Sara04 @rutgerfick . ### `dmipy.core.modeling_framework` For the MultiCompartmentAMICOModel and the MultiCompartmentAMICOSphericalMeanModel we have to...
Hello! We are reaching out because we would love to have your project listed on [Open Neuroscience](), and also share information about this project: Open Neuroscience is a community run...
When we pass the volume fraction of both the intra and the extra cellular compartments to the function that computes the perpendicular diffusivity through the tortuosity constraint, there could be...
There's a minor bug that concerns the behaviour when the `KeyError` exception is raised in the parameter range check of the `set_equal_parameter` method in the DistributeModel class. An error is...
@rutgerfick do we want to try to get Dmipy listed in the learn-neuroimaging platform? They've been working on it during OHBM's hackathon and they did an amazing job. https://github.com/learn-neuroimaging/tutorials-and-resources https://learn-neuroimaging.github.io/tutorials-and-resources/...
issue copied from email from Faye McKenna. > I am using the Noddi-Bingham model (https://github.com/AthenaEPI/dmipy/blob/master/examples/example_noddi_bingham.ipynb) and see that the code outputs several parameters (psi, beta fraction, ODI etc) but not...
Following the work of Dr. Dela Haije, it is of interest to see if "true" positivity constrained CSD has an influence on microstructure prediction. This issue is to include the...