computational-pathology topic
HIPT
Hierarchical Image Pyramid Transformer - CVPR 2022 (Oral)
qupath
QuPath - Bioimage analysis & digital pathology
pathml
Tools for computational pathology
CLAM
Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering
tiatoolbox
Computational Pathology Toolbox developed by TIA Centre, University of Warwick.
StainTools
Tools for tissue image stain normalisation and augmentation in Python 3
FAST-Pathology
⚡ Open-source software for deep learning-based digital pathology
tcga_segmentation
Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024
Self-Supervised-ViT-Path
Self-Supervised Vision Transformers Learn Visual Concepts in Histopathology (LMRL Workshop, NeurIPS 2021)
compay-syntax
:microscope: Syntax - the arrangement of whole-slide-images and their image tiles to create well-formed computational pathology pipelines.