Sigve Nakken

Great! Thanks a lot for handling this so quickly.

I ran into the same issue when running a few tumor-only samples, using `--tools mutect2,strelka`. However, I realized that my interval BED file used was not sorted (i.e. chromosomal order),...

I am serving both GRCh37 and GRCh38, now using the most recent v95 of the API. I will have a a check if it still returns the same warnings.

Hi Bjoern, Thanks for reaching out and offering assistance. However, a Galaxy integration is not only planned, it is in place already! So not completely sure what Eivind was thinking...

I am generally all for this initiative, but I would need someone to help out. @sveinugu @FBernal-oPs Is this something you can help with? Or anyone else in the Oslo...

Hi, @bgruening, following up on this. Thanks for pulling this together so quickly! I just noticed one small thing in the files listed, one "summary" seem off, i.e. last line...

Hey Peter! Thanks for trying out oncoEnrichR. I just played a bit with this myself as well (using v1.3.2), and while I was succeeding at first, I eventually ran into...

Btw @jeffreyhanson (somewhat related to https://github.com/eblondel/zen4R/issues/98): got any experience with downloads from Google Drive using `googledrive` package? I am a bit puzzled by the inconsistent success in downloading success and...

@peterwu19881230 I have made some new attempts tonight with `oncoEnrichR::load_db()`, successfully retrieving the data. I would recommend you try to repeat the call to `load_db()`, and see if the error...

HI @slukowski, Thanks for reaching out! This is probably a bug somewhere, could you forward the queryset, or the complete command you are running when it fails? Kind regards, Sigve