nf-core

circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data

nf-core

DEPRECIATED! Please use nf-core/tools instead

nf-core

Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream analysis.

nf-core

Please consider using/contributing to https://github.com/nf-core/sarek

nf-core

Demultiplexing pipeline for sequencing data

nf-core

A bioinformatics best-practice analysis pipeline for epitope prediction and annotation

nf-core

(Meta-)genome screening for functional and natural product gene sequences

nf-core

Analysis of Chromosome Conformation Capture data (Hi-C)

nf-core

Precision HLA typing from next-generation sequencing data

nf-core

Image Mass Cytometry analysis pipeline

nf-core