Mark Keller

Results 354 issues of Mark Keller

`coordination_values` should be able to be provided for any Wrapper instance

feature

I tried to follow the feedback described in a previous PR that contributed DensMAP https://github.com/scverse/scanpy/pull/2684#issuecomment-1764564449 but re-implemented on top of the state of the current scanpy main branch. I did...

**User story** See https://github.com/keller-mark/pizzarr/issues/59 **Preferred solution** **Possible alternatives**

**User story** See https://github.com/keller-mark/pizzarr/issues/59 **Preferred solution** **Possible alternatives**

From discussions with @pieterjanvc the non-R6 API would be much more natural for the R ecosystem - https://github.com/r-lib/R6/issues/42 - https://adv-r.hadley.nz/oo-tradeoffs.html - http://adv-r.had.co.nz/S3.html (Best Practices section) - https://rconsortium.github.io/OOP-WG/

enhancement

Python implementation: https://github.com/zarr-developers/zarr-python/blob/5dd4a0e6cdc04c6413e14f57f61d389972ea937c/zarr/indexing.py#L367

enhancement

Also: support zero-based integer indexing with a `zb_int()` function (analogous to `zb_slice()`)

enhancement