Mark Keller

Results 354 issues of Mark Keller

The URLs do not make sense when using the widget remotely See https://github.com/vitessce/vitessce-python/issues/88#issuecomment-887633023

feature

Currently, calling `vc.layout()` will overwrite previous values for component position and dimension in the grid layout. The `layout()` function could be updated to take into account existing x/y/w/h values and...

feature

Example of spatial datasets which include high-resolution TIFFs in the "unstructured" part of the AnnData object: `adata.uns["spatial"][sample_id]["metadata"]["source_image_path"]` https://scanpy.readthedocs.io/en/stable/api/scanpy.datasets.visium_sge.html#scanpy.datasets.visium_sge

enhancement

https://www.dropbox.com/s/cmbvq2og93lnl9z/pbmc_10k_v3_filtered_feature_bc_matrix.h5?dl=1 Also see Seurat's `Read10X` function

enhancement

In addition, the following code returns an error message. ```py vc.layout((umap | pca | cell_sets | genes) / heatmap); ``` ```js Config validation failed [ { "keyword": "type", "dataPath": ".layout[0].w",...

bug

Currently, `hconcat` and `vconcat` split the views equally. If two views are provided, they split into halfs. If three are provided, then thirds, etc. We could add a new parameter...

feature