Christian Meesters

Hi, can you please elaborate, why this is considered a bug of Snakemake? Snakemake uses asyncio, an internal Python library. And the limitation stems therefrom. Perhaps, if you have a...

ok, I'll give it a try. Thank you! I _think_ to have created a simple script easing the publication of CiTOs, but I might only find the time by next...

[Yes, it's working, already.](https://test.registry.knowledgepixels.com/np/RAZysikao4e5d9Rfeja6w_lLgsVfdzXSv_rFdyT78_w1Q). Was simple enough. Needs a bit of polishing before being published, and I do not know where, yet. This repo? PS the `pyproject.toml` is a bit...

Not sure, what is going on here. Please provide a minimal example and logs. Indicate the plugins you are using and their versions. Thank you.

> Should there be a snakemake report plugin for each executor or storage plugin? [There is](https://snakemake.github.io/snakemake-plugin-catalog/index.html), isn't it? Frankly, I do not understand your request. A report gets generated locally....

Hm, did I make the idea understandable? If the issue persists, please describe it and perhaps provide some error log or further information.

Your minimal example works like a charm for me. Are you trying to trigger Snakemake in a more elaborate shell script? Could it be that you are dealing with nested...

yep, this is an issue in your script, not a bug in Snakemake. Your $2 line is an unterminated line. In the second part after && you have an unescaped...

I do not get it. You start with a Snakefile like this: ```Python rule: run: print("hello, world") ``` which you can execute with `snakemake -c1` just fine, regardless of double...

I'm afraid, I cannot reproduce this behaviour. The plugin only submittes a job at a time, yes. The speed will depend on file system latency, mainly. But with `-j unlimited`...