ols4

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haideriqbal

Add split synonym types to v1 search endpoint

1

## Overview This PR addresses the issue "Return synonyms in v1 search endpoint" by adding support for returning synonyms split into different OBO synonym types while maintaining full backward compatibility....

Copilot

jamesamcl

MCP routing issue in prod only

1

In wwwdev we have one backend instance, MCP works fine In www we have two backend instances. Sometimes MCP SSE messages go to one of them and sometimes the other....

jamesamcl

Fix local parameter to use isDefiningOntology and remove confusing imported field

3

The `local` parameter in the search API was not working correctly. When set to `true`, it should only return terms that are defined in their own ontology (e.g., only EFO...

Copilot

display hierarchical properties in frontend

1

jamesamcl

The README is very difficult to read. This is a first step towards improving it that runs `npx prettier --prose-wrap always --check "**/*.md" --write` to lint its formatting, fixes code...

cthoyt

Fix exact match search to prevent partial matches in results

1

## Problem The `/api/search` endpoint with `exact=true` parameter was incorrectly returning partial matches instead of true exact matches. For example, searching for "Oomycetes" with exact match enabled would return: -...

Copilot

Should be split into different types of synonym

jamesamcl

Exact match returns non-exact match result

1

https://www.ebi.ac.uk/ols4/api/search?q=Oomycetes&ontology=ncbitaxon&exact=true This returns 3 results: * Oomycota * Oomycota incertae sedis * unclassified Oomycota However only Oomycota is an exact match (it has "Oomycetes" as a synonym)

jamesamcl