ncbitax2lin

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Could not find a version that satisfies the requirement

3

Hii! I am trying to install this package, but I get error: Could not find a version that satisfies the requirement I am using PIP 21.3.1 Could you please help...

ParthKRaval

Could not get any output

3

Hello, When I run the command; `ncbitax2lin --nodes-file taxdump/nodes.dmp --names-file taxdump/names.dmp ../ncbi.tax.10.txt` It does not produce any output. the log messages were; ``` 2022-07-14 12:45:57,883|INFO|time spent on load_nodes: 0:00:04.126396 2022-07-14...

eray-sahin

suggestion: output lineage tax id instead of full name

5

If it's possible to have lineage tax id instead of full name ? ``` taxid kindom phylum class order family genus species 11138 10239 2732408 2732506 76804 11118 694002 694005...

mewu3

How use your script to trace protein ID based on its tax ID？

2

Hi, I am a PhD student and use the ncbitax2lin recently. I want to trace the proten ID with NCBI taid, I have download prot.accession2taxid and get the second column...

Xueliang24

I'm working on metagenomics and I have a dataset comprised of various identifications performed by different softwares. The dataset has this structure: Assignment | TaxID | Number_of_reads I was adding...

xiaodre21