yilunhuangyue

For plant genome

4

Hi, I used FastANI for several plant genome and did get results. The ANI values were higher for species with closer genetic relationship. But I am not sure if the...

assembled chromosome-level scaffold is less than expected

2

Hi, I am processing a genome with 9 chromosomes, but I only got 8 chromosome-level super scaffolds. How should I adjust the process to get the correct number of chromosomes....

IndexError: index -1 is out of bounds for axis 0 with size 0

7

Hi, Thanks for developing the tool. I tried the example of ginger and successfully procressed. But When I used my own triploid genome (3n=63), I met an error. My config...

falcon_unzip breaks down when running blasr

2

hello, I met an error when running falcon_unzip, It seems the pipe stopped when running blasr, there was just tmp_aln.bam.tmp in /3-unzip/0-phasing/000000F/blasr, the last lines of stderr shows as follows:...