Anurag Priyam

Results 67 issues of Anurag Priyam

I wonder if a log transformation or something can help here. Need to check if we don't do that already.

BLAST following against `Sinvicta 2-2-3 cdna subset` (the bundled nucleotide database). The first hit has two HSPs. Hovering over `a` completely hides `b`. On un-hovering `b` remains hidden. ``` >SI2.2.0_06267...

bug

- [x] Should make best use of available space. Should line up with Kablammo at all times. Should resize when screen is resized. - [ ] Copying the alignment should...

feature
refinement

I guess the title says it all. Found this one on the Todo wiki page (which I am cleaning up, and intend to remove soon).

feature

Ability to visualise taxonomy information like a tree would be helpful in various scenarios. ``` |---- S. invicta (8) |---- Formicidae (19) -| | |---- C. flordanus (11) Hymenoptera (26)...

feature

BLAST results are readily converted to GFF3, which can be subsequently visualised in JBrowse and other genome browsers. Thus allowing hits to be compared to genome annotation (or vice versa),...

feature

See - https://groups.google.com/d/msg/sequenceserver/dlM95Mjqahc/Jr79V8E0CQAJ

feature

With the aim of providing a structured way to extend and override the views and js and css.

feedback
help wanted

Tests fail when invoked using `parallel_rspec` command, probably because of shared state between threads.

help wanted

Currently Uniprot links are rendered only for Uniprot db. NR contains hits from SwissProt and PDB. Would be good if NR hits could be linked to corresponding resources apart from...

feature
bite-sized