Bingjie Xue

Hi, I'm running DriverPower on my own train and test elements. I noticed that some of the elements have missing raw_p and/or raw_q values. Does the result only show scores...

Fail to create iGD database from a list of source files

1

when creating the iGD database from a list of source files, got the following error: ``` igd create "/home/bx2ur/Documents/Projects/bedbase_tutorial/outputs/bedbuncher_output/047b5366ecc9d4421f29570ad3b0c560/bedsetTestSpace2.txt" "/home/bx2ur/Documents/Projects/bedbase_tutorial/outputs/bedbuncher_output/047b5366ecc9d4421f29570ad3b0c560/bedsetTestSpace2" "bedsetTestSpace2" -f Create igd from /home/bx2ur/Documents/Projects/bedbase_tutorial/outputs/bedbuncher_output/047b5366ecc9d4421f29570ad3b0c560/bedsetTestSpace2.txt: Floating point exception (core...

Error: buffer overflow detected: terminated; Aborted (core dumped)

2

I'm trying to use `igd search` in the `bedhost` endpoint that searches bed files by given genomic internal. I tested it with ``` igd create $BEDBASE_DATA_PATH_HOST/bed_files $BEDBASE_DATA_PATH_HOST/outputs bedbaseigd igd search...

Recent issue with input bed that only have 3 columns

1

Hi.... I recently start to have prolem with `pybedtools.BedTool()` when the input bed file only have the first 3 columns like ``` chr1 3012568 3012773 chr1 3094410 3095612 chr1 3113593...