xiaobaiymq

Hi-C integrated assembly result selection

3

hello, I get two results of the Hi-C integrated assembly : hic.hap1.p_ctg.gfa and hic.hap2.p_ctg.gfa hic.hap1.p_ctg.gfa :354 contigs, N50 28114168bp, N75 28114168bp hic.hap2.p_ctg.gfa :180 contigs, N50 30303413bp, N75 29191692bp Which one...

ALLHiC used for Pacbio hifi data (assembled by hifiasm)

1

Hello I use hifiasm to assemble the Pacbio hifi data, and then use allhic to anchor the obtained haplotypes to the chromosomes. my genome is diploid, and 9 chromosomes (2x=2n=18)....