xiao-kong-long

Results 9 comments of xiao-kong-long

hello, where the toy data folder?

Hello, @yingfang3333 I wonder know if the slots of **uns, obsm, varm and obsp** is convert from .rds file, or added in annadata? I transformed my seuratObject to annodata, find...

Hi, I wonder know how to process the spatial information of 10x Visium data, follows are my code : In R : ``` seurat.object = Load10X_Spatial(data.dir = h5.dir, filename =...

The information of c0, c1, c2 and x, y, z: ![image](https://user-images.githubusercontent.com/53474978/195988290-e857357b-5d4c-4425-b9ee-0a8fa7bab4ba.png) which is total identical to the result of tutorial.

The image coordinates of spots is range from 2000 - 10000, according the following formula: ![image](https://user-images.githubusercontent.com/53474978/195990010-e0f9c5b3-4e9c-4ed7-b163-5af8527f8756.png) When translating the large number d(u,v) to weight of edge as following formula: ![image](https://user-images.githubusercontent.com/53474978/195990506-6770115c-c72d-4cba-ae24-1b11b5fbce87.png)...

All I have done is : `conda create -n Hu_spagcn_env python=3.8.8` `conda activate Hu_spagcn_env` `pip install pip3 install --user SpaGCN -i https://pypi.mirrors.ustc.edu.cn/simple/ ` `pip install opencv-python -i https://pypi.mirrors.ustc.edu.cn/simple/ ` and...

Hello, don't kown the reasons, after a dinner, the problem is disappear.

May tutorial code exist a bit mistake? #34