libpll
libpll copied to clipboard
xflouris
Phylogenetic Likelihood Library
Document in the [wiki](https://github.com/xflouris/libpll/wiki) how to customize the testing framework, e.g. disable memory checks, execute specific tests using wildcards, speed tests, specific architectures
Add `const` to function parameters where it would make code more readable. Use `restrict` keyword to limit pointer aliasing.
Similar to enhancement request on the old tracker from 2013: https://app.assembla.com/spaces/phylogenetic-likelihood-library/tickets/72-port-likelihood-function-xeon-phi/details# Cross-posted from: https://github.com/amkozlov/raxml-ng/issues/16 Cheers! Gabe
Hi, I'd like to package libpll for Debian. The easiest way to distribute a certain status would be if you could add a tag. If you currently are not yet...
Implement `_mm256_exp_pd()` for computing transition probability matrices (Issue #105 ) The intrinsic does not map to an instruction and is only available in the [Intel Small Vector Library](https://software.intel.com/en-us/node/583228). There exists...
> Hello, > I was wondering whether it is among your plans (and whether it is possible to implement) to add protein mixture models to RaxML, particularly C10-C60 (http://bioinformatics.oxfordjournals.org/content/24/20/2317.short), and...
Document the following: - p-matrix computations (theory + usage) and how pmatrix updates work (rate matrix specification for each rate category) - Document the `PLL_ATTRIB_PATTERN_TIP` attribute, and the various maps...