seeyou young

same issues.do you know how to solve this probram? > Est.pbmc.bulk = music_prop.cluster(bulk.eset = bulk.eset, sc.eset = SC.eset, clusters = 'celltype', group.markers = Ipmarkers,groups = 'clusterType', samples = 'orig.ident', clusters.type...

same issues

Hi Orion, Encountering the same issue as well, did you ever figure out how to resolve it?

I get the same error with u,and i have tried many methods from the issues,but get the same error with u.

tombo preprocess annotate_raw_with_fastqs --fast5-basedir /home/YANGSIYU/data/project/m6A/2021-4-10-data/test2/tombo/A/fast5_pass_single/0 --fastq-filenames pass.fastq --processes 15 --overwrite [09:44:49] Preparing reads and extracting read identifiers. 100%|███████████████████████████████████████████████████████████████████████████████████████| 4000/4000 [00:02

pass.fastq: @3a4c4f4c-94e1-4a81-b73d-cd680a5007c5 runid=7ef2370e22dedd664bbd1f582b56b8df7d39db4d read=13 ch=811 start_time=2020-11-10T09:52:53 AGCAAGAGAAGCCAAGCACUCGUGGUGGACUCAAGCACCCAGGGUGACCCCUGCUUCGUACCAGCUAGGAAAAUGACCGCCUCUCGAAGGAGAAUGUUUGAAAAUCCCCCCAACCCCAUCAACAACCCAC + *,+%&%))'&))*'2/+$(%''-436)(++1%-4=.%%,%%5667:234;6:5-,+*)'&*54-/.-43;?:5.;)/-266(&&&(%(*-+4.476*046-+(&)'//)/&%%'331*&%%%&%%'.-$& @681a32d7-be17-4de9-9358-ef3d5d9b2614 runid=7ef2370e22dedd664bbd1f582b56b8df7d39db4d read=12 ch=693 start_time=2020-11-10T09:52:53 ACUGUCUAAAUUUUUUUUUGUCUUAUAGAAAAUUUUUCUAUACUGAUUGGUUUCAUAGAUGAUAUGGUUUUAUACACAGACUAAACAAUACAGCACUUUGCCAAAAAUAAGUGUAGCAUUGCUUAAACAU + %%47/*57+(:'843&1)48.%-'-*355::;7'4/=*9@;7:>?@;972430%)'0469871%&*%78:;+0-.-5:6973;679:9-8C@?7?C

I met the same problem.Is that mean i should change T to U in the transcript reference?

hi, thanks for your excellent word, i met the same error, do u kown how to solve this error? >>> cosg.cosg(dat, ... key_added='cosg', ... mu=1, ... n_genes_user=50, ... groupby='seurat_clusters') **finished...

Thanks!