FlowIO
FlowIO copied to clipboard
whitews
A Python library for reading and writing Flow Cytometry Standard (FCS) files
Hi there, I'm sure this is a going to be trivial but I just can't seem to get my head around it: Opening up a standard FCS2.0 file in FlowIO...
From the FCS3.1 spec: > $PnE > If the floating point data type is used (either $DATATYPE/F/ or $DATATYPE/D/), then all parameters shall be stored as linear with $PnE/0,0/. and...
Adds support for setting `$Pn[DFLOPTV]` and `$PnCALIBRATION`. Skips the deprecated keywords (`$Gn*`, `$PKn`, `$PKNn`) and the rarely used ones (`$RnI`, `$RnW`, `$CSVnFLAG`). FlowKit test run: https://github.com/primitybio/FlowIO/actions/runs/3130423878 --- Last PR for...
These fields can be padded with zeros wide enough to fit ~1TB of data. This saves 158 lines of code+tests and improves perf by avoiding calling `_build_text` twice. FlowKit tests...
Hey, The current release doesn't allow users to choose which dataset they want to load if a file contains multiple datasets or am I missing something? It seems like all...
Hey @whitews, there is the new [FCS3.2 standard](https://flowcyt.sourceforge.net/fcs/fcs32.pdf) which has some new keywords, especially the `PnDATATYPE`. This allows single columns to have another datatype then the one set in `DATATYPE`...