Szonja Weigl
Szonja Weigl
[BUG] Fix `TimeSeries` data does not match length of timestamps should raise an error when created
## Motivation This is a follow up on the issue described in #1536 to prevent a `TimeSeries` being created with timestamps that does not match the length of data. This...
#1453 introduces a basic read tutorial, but a more advanced version is needed where we can add more coverage of ``Container`` base class features > > Thanks for putting together...
## Description I'm trying to create an extension with a `datetime` attribute (see the snippet below), however when creating such extension with a datetime object raises an `ObjectMapper` error (see...
### What happened? When running nwbinspector on a file that uses ndx-miniscope to add Miniscope device, it flags a PYNWB_VALIDATION for the `ImagingPlane` as: ``` 1 PYNWB_VALIDATION =================== 1.1 /Users/weian/catalystneuro/demo_notebooks/C6-J588-Disc5.nwb:...
Hey, I have ecephys data from the Tye lab in legacy `OpenEphys` format (.continuous files) and I'm using `OpenEphysRecordingInterface` from `neuroconv` to write the data to NWB (which uses `OpenEphysLegacyRecordingExtractor`...
Hey, I am working on a project to convert Miniscope data to [NWB](https://www.nwb.org) format. The configuration file that I received ("metaData.json") contains a "deviceType" parameter which is "Miniscope_V3". After looking...
- Uses the same widget as `pynwb.ophys.TwoPhotonSeries` - The widget is renamed to `PhotonSeriesWidget` to better represent it can be used both for `pynwb.ophys.TwoPhotonSeries` and `pynwb.ophys.OnePhotonSeries` Demo screenshot:
Rendering `SpatialSeries` data with `nwbwidgets` is not possible when `spatial_series.data.shape[1] == 1`. I noticed this issue when when trying to visualise `SpatialSeries` data for a [dandi dataset](https://dandiarchive.org/dandiset/000230/0.220426.1130) : "animal_direction" which...
This experiment from @JBFord has 3 signal streams with mult-block (10 blocks) setup, the reader `TdtRawIO` can parse the header but `TdtRecordingExtractor` returns empty list of times and traces, sampling...
**Is your feature request related to a problem? Please describe.** I would like to ingest `trials` from an NWB file. Spyglass currently only supports extracting intervals from `nwbfile.epochs` as [IntervalList](https://lorenfranklab.github.io/spyglass/latest/api/common/common_interval/#spyglass.common.common_interval.IntervalList)....