nanocomp
nanocomp copied to clipboard
wdecoster
Comparison of multiple long read datasets
Hi, I was intending to edit/generate more readable plots by adjusting the font size / bolding the text along the axes. I tried adding the format option to create a...
Is it possible to use nanocomp to compar runs if each run contain several fastq.gz files ?
Hello, I am using NanoComp v1.23.1 and got a weird plot after filtering my input fastq files (see attached image).  When I did the same command on...
Hi Wouter, I'm trying to compare sequencing data from two different sequencing platforms (Pacbio sequel and revio) on the same graph but I can only get a graph where both...
Hi, It seems that NanoComp 1.22.0 is having this problem- ``` 2023-07-07 13:53:55,634 Using sequenced read lengths for plotting. 2023-07-07 13:54:55,236 NanoComp: Creating barplots for number of reads and total...
Hi Wouter, we have noticed that the length violin plots do not necessarily fit with the Length Histograms when using several samples. Plots were created using v.1.22.0 but I tried...
It would be nice if a parameter could be added that can take the native plotly theme (`template`) argument and update the plots theme accordingly.
Hello, I am running into an issue (also described here for NanoPlot: https://github.com/wdecoster/NanoPlot/issues/304) where the static .png files are not created by NanoComp unless I am running on a server...
In the command, I listed my files in the order I wanted them and provided names for the files in the same order. The summary stats are correct. However, the...
I noticed that the number of reads does not match that of seqkit stat --all or samtool stats at various stages of filtering to then mapping basecalled reads. **For instance...
