wbf520qcp

Not getting clone tree

11

Hi, Thanks for developing this fantastic tool. I got a couple of problems when running my data. (1) I first ran it on a small dataset (single patients with about...

Hi Thanks for creating this fancy tool. I wonder if we can save the figures in pdf format? The font on some figures are small. I wanted to make changes...

Error in AUCell step

1

Hello, I'm running SCENIC on over 50,000 cells and encountered errors at runSCENIC_2_createRegulons and runSCENIC_3_scoreCells runSCENIC_2_createRegulons returned errors as below, but still generated intermediate files. pandoc: Could not find data...

not able to install on hpc cluster

3

I have a file with >50,000 cells, running SCENIC on my laptop seems taking forever. I tried to move to HPC but cannot install packages with the error as follows:...