svaba

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First thank you for such a great tool. i use "Version: 1.2.0" Let's say i run svaba with large no of patient data (e.g., 167) .But its runining slow mode.,...

CHOWDHURY098

https://github.com/walaj/svaba/blob/ab39e3f656ccf34a985c4ac632426bb4be744e15/Dockerfile#L44 is: ``` # Compile svaba with htslib WORKDIR /opt/svaba/build RUN cmake .. \ -DHTSLIB_DIR=/usr/local ``` must be: ``` # Compile svaba with htslib WORKDIR /opt/svaba/build RUN cmake .. \...

kandabarau

Error: Found chromosome in region file not in reference genome. Skipping

5

Hello! I am trying to run svaba for targeted SV detection. The command works with Svaba v1.1.0 but with v1.2.0 it throws the following error: ``` "Found chromosome in region...

shguturu

Hope you have been well! I have a couple of samples that that are getting a “segmentation fault” error. I have given plenty of RAM (250Gb) so I don’t believe...

ahwanpandey

Hello SvABA Team, I am using SvABA for structural variant calling in a whole exome sequencing (WES) project. My dataset includes WES data from a family with three affected children,...

onurerdoganmd