Vince Carey

Thanks for submission, but please look at your compiled vignette. Vignette is not demonstrative. Should show some results like ``` > head(DOTERM) do_id Term 1 DOID:0001816 angiosarcoma 2 DOID:0002116 pterygium...

When I compile your package and look at vignette this is what I see:  please make this a document that a user will be able to learn from. It...

While I am passing this package, it is using obsolete methods. ``` > GO.db GODb object: | GOSOURCENAME: Gene Ontology | GOSOURCEURL: http://current.geneontology.org/ontology/go-basic.obo | GOSOURCEDATE: 2022-03-10 | Db type: GODb...

This is also somewhat confusing: ``` > DO.db::DO() Quality control information for DO: This package has the following mappings: DOANCESTOR has 6569 mapped keys (of 11002 keys) DOCHILDREN has 1811...

there is a sqlite file in your package exceeding size 5mb i am deliberating hiw to proceed need a few more days

I am sorry to be taking so long with this. You have done a good job of emulating the GO.db and using the AnnotationDbi methods. I am still conflicted with...

Thanks for your contribution, it looks very interesting. However, yasomi is not in CRAN. At this time, Bioconductor packages can depend only on other Bioconductor packages, or packages distributed by...

we will reevaluate next week thanks

the .o and .so files in /src must be removed

``` -- re-building ‘Introduction.Rmd’ using rmarkdown Quitting from lines 66-68 (Introduction.Rmd) Error: processing vignette 'Introduction.Rmd' failed with diagnostics: "batch_som_optim_continuous" not available for .C() for package "FuseSOM" --- failed re-building ‘Introduction.Rmd’...