sequenceTubeMap
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vgteam
displays multiple genomic sequences in the form of a tube map
We would like to be able to use node-sequence-removal simplification on Lancet graphs to see how tumor and normal reads flow through the graph structure.
See `Tumor-specific A -> AAAAAAATATATATATATAT INS variant at chr1:86645909` for example. The reads should stay separated by sample even as they skip nodes.
The part of a read inside a node is not clickable or hover-able.
As a Lancet user, I will have some Lancet output (or some variants from another source). I have a list of called variants, and I want to inspect my calls...
Some people [are having trouble with the tube map not being able to find vg](https://www.biostars.org/p/9592563/). In this case, we bombard them with useless `exited with code -2` errors in the...
I noticed that some paths or reads stay highlighted even after the mouse has left them. It looks like it only affects those with a "curve". Simple rectangle paths are...
With the fix for #322, reads are able to curve around freely and don't look as much like the iconic London tube map with its schematic lines and 45 degree...