vetmohit89

ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all()

4

Hello, I have generated data.tsv file from squigglePull.py using multi fast5 file. Now, I am trying to run squigglePlot.py but getting below error when I am using data.tsv file as...

ImportError: Cannot load backend 'TkAgg' which requires the 'tk' interactive framework, as 'headless' is currently running

1

I am trying to run segmenter with the following command python segmenter.py -s data.tsv -ku -j 100 > signals_stall_segments.tsv It is giving following error. Traceback (most recent call last): File...

Hello, Please help me with fixing this issue. I just want to two color coded volcano plot. Blue for Fold_Change < -1.5 & p_value # Continue with the EnhancedVolcano function...

Not able to install plugin in HPC cluster

1

I am tring to install ont-vbz-hdf-plugin_1.0.2-1.focal_amd64.deb in my HPC cluster. Its description is as following Description: Red Hat Enterprise Linux Server release 7.9 (Maipo) Release: 7.9 Codename: Maipo I tried...

Hello, I am very new to this tool. I want to show modification data on circos plot. I think I have to run circos.genomicPoints function. but example itself is showing...

failed to get modbase info ... skipped: AUX data not found

12

Dear, I have collected RNA004 data in fast5 format. Thereafter, I converted individual fast5 to pod5 with --strict argument. Here is my dorado command: dorado basecaller \ --min-qscore 10 \...