Chen Sun
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issues of
Chen Sun
```[ 2019-04-29 10:13:21 ] Collecting breakpoints Traceback (most recent call last): File "/home/cnsun/.local/bin/svtyper-sso", line 11, in load_entry_point('svtyper==0.7.0', 'console_scripts', 'svtyper-sso')() File "/home/cnsun/.local/lib/python2.7/site-packages/svtyper/singlesample.py", line 848, in cli sys.exit(main()) File "/home/cnsun/.local/lib/python2.7/site-packages/svtyper/singlesample.py", line 841,...
The error log shows that it can not open the alignment file if I put the bam file name together with comma separated. SVtyper works well with it.
Can you provide centromere and telomere data for hg19? or the way to generate these data? Thanks!