Veit Schwämmle

Results 10 issues of Veit Schwämmle

Container (docker, singularity, ...) became a standard in running software and workflows. The question is how and whether they should be described via EDAM. I do not have a straight-forward...

discussion

Update the following URL to point to the GitHub repository of the package you wish to submit to _Bioconductor_ - Repository: https://github.com/veitveit/vsclust Confirm the following by editing each check box...

ERROR
2. review in progress

Update the following URL to point to the GitHub repository of the package you wish to submit to _Bioconductor_ - Repository: https://github.com/computproteomics/PolySTest Confirm the following by editing each check box...

OK
3a. accepted

Nice tool! This is a minor issue: The tab-delimited output file with the peptide data (maybe also any of the other tab-delimited files) has a tabulator at the end of...

We are using moFF on a larger dataset (27 label-free runs) and it takes a very long time (about 40h), even with setting for 16 threads and 150GB RAM. Are...

- Project Accession: [ PXD005300] - URL Project: [ https://www.ebi.ac.uk/pride/archive/projects/PXD005300] - PubMed Accession: [28934504 ]

help wanted
project-to-annotate

We are trying to run the maxquant example in the development version but get an error when running it without config file or with this one: https://github.com/compomics/ms2rescore/blob/main/examples/maxquant-ms2rescore.toml Is there a...

[//]: # (You can add comment regarding your issue hereafter) ### Comments Updating MGF synonyms and linking to PSI-MS ontology [//]: # (End of issue comments) ### Hereafter are the...

[//]: # (You can add comment regarding your issue hereafter) [//]: # (End of issue comments) Hereafter are the proposed values for the attributes of the new term | key...

concept/term addition
broad conceptual issue
discussion
more info needed