Veit Schwämmle

Thank you for the thorough review. Below you find my comments and ticked parts. __Question__: This package comes from a tool that has a version number large than 1. How...

Thank you again for the review @jianhong I should have managed to solve all raised points with this new commit

Hi @Maux82, Thanks a lot for the help! I am running the full set of 27 runs, and I am not using the _--match_filter_ option. Does setting the filtering to...

Isn't there something wrong with the annotation of the fragmentations? For example, I can see that some files were run with ETD, ETciD and EThcD at the same time? Somehow...

Hi Patroklos, Thanks a lot for the quick and informative reply! We now understood the setup.