Peter Vegh
Peter Vegh
See https://github.com/Edinburgh-Genome-Foundry/DnaChisel/issues/62#issuecomment-1106482376
Due to GDPR, MaxMind has changed the GeoLite2 Database access policy used in [conf.py](https://github.com/Edinburgh-Genome-Foundry/lala/blob/07dcd9a6cb5fe7aba86e310537dbadf8f682c2a3/lala/conf.py) https://blog.maxmind.com/2019/12/18/significant-changes-to-accessing-and-using-geolite2-databases/ Access to GeoLite2 requires registration (free of charge).
Tried installing this for scanpy, as recommended (`pip install mnnpy`), on a macOS High Sierra (v10.13.4) within a Miniconda environment, but it returns an error: ``` clang: error: unsupported option...
Typo
Excellent tutorial! In case you want to improve it, `hello.o` should be `hello.c`.
In 'Simulate Golden Gate Assemblies' the chosen enzyme is ignored if an assembly spreadsheet is specified, because of this issue: https://github.com/Edinburgh-Genome-Foundry/DnaCauldron/issues/9
If [`blastn`](https://github.com/Edinburgh-Genome-Foundry/Geneblocks/blob/87a8df33fab2295e357884fa2742d3e03e98d9a5/geneblocks/CommonBlocks/commonblocks_tools.py#L135) is missing, print a friendly error and installation instructions. See also https://github.com/Edinburgh-Genome-Foundry/DnaChisel/issues/58.
### Setup I am reporting a problem with Biopython version, Python version, and operating system as follows: ```python import sys; print(sys.version) import platform; print(platform.python_implementation()); print(platform.platform()) import Bio; print(Bio.__version__) ``` ```...
### Setup I am reporting a problem with Biopython version, Python version, and operating system as follows: ```python import sys; print(sys.version) import platform; print(platform.python_implementation()); print(platform.platform()) import Bio; print(Bio.__version__) ``` ```...
`pdf_reports` is a heavy dependency and is not required for the core functionalities (_cf._ https://github.com/Edinburgh-Genome-Foundry/DnaChisel/issues/102).