Valentyn Bezshapkin comments

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Valentyn Bezshapkin

color labels raise error

Same issue when using more than 2 labels.

Feature request: volume mounting

+1, similar issue needed for workflow to run with docker container & massive databases necessary for app to finish.

BrokenPipeError: [Errno 32] Broken pipe near the end of anvi-pan-genome

@meren just hinting on possibly low effort-high yield replacement of `muscle` with [PyFamsa](https://github.com/althonos/pyfamsa).

comments uses // instead of #

Same issue, Windows 10 and VS Code 1.73.1 The problem is in `cython.configuration.json`. I manually fixed it by replacing the old `comments` section in the file: ``` "comments": { //...

Error when Conda/Script directive used simultaneously

The problem persists in smakemake `7.18.2`

Error when Conda/Script directive used simultaneously

Hello @pvandyken, My minimal case is exactly the same as @zia1138 & the behavior is identical: ``` File "/path/.snakemake/scripts/tmpmm5hfx7b.script.py", line 5, in from Bio import SeqIO ModuleNotFoundError: No module named...

Add Singularity arguments for specific rules in Snakefile

Any progress with integrating that into a stable build?

there must be an error: xx deleted from xx that now is empty, but not assigned to a cluster

Same error on clustering protein sequences with `easy-cluster`, command I used: ```bash mmseqs easy-cluster raw/proteins.faa.gz processed/proteins.id50.c90 tmp \ -c 0.9 --min-seq-id 0.5 --threads 16 --cluster-reassign ```