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                                            valei

strainphlan

Hi, I'm running strainphlan on my Centos7 system. I accurately followed the guide I found here. I got this error message "No alignments found to concatenate" and "An error was...

RGI bwt: paired end VS single end. Which one is better?

Hi, I ran RGI bwt in a metagenome sample in two different ways: 1) using as input R1 and R2 paired-end files; 2) using as input a concatenated file R1+R2...

mg-rast-tool vs mg-rast web page. Why such differences?

Hi, I'm using mg-rast-tool in order to download KO abundance at level1. I ran as follows: ``` mg-abundant-functions.py --user myuser --passwd mypassword --token mykey --id "mgmxxxxxxx.3" --level level1 --source KO...