terrance shea

sequence present in 001_best_spades_graph through 004_bridges_applied lost in 005_final_clean

3

Hello- We are using Unicycler (v0.4.4, mode = normal) on a project where so far out of roughly one hundred hybrid (Illumina paired end + ONT (some samples with 1D...

racon introduces large (50-250 base) deletions into polished canu assembly consensus

6

Is there any previously described racon polishing behavior where racon, using only ONT data, introduces deletions into the polished consensus? And if so is there a suggested racon parameter (or...

Operating system: RHEL 7.8 Package name: ipa (wrapper) version=1.8.0 Conda environment: ``` _libgcc_mutex 0.1 conda_forge conda-forge _openmp_mutex 4.5 2_gnu conda-forge amply 0.1.6 pypi_0 pypi appdirs 1.4.4 pypi_0 pypi attrs 23.1.0...