wsi topic

List wsi repositories

bertwsi

28
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9
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Word Sense Induction with BERT MLM

deepslide

475
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135
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Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for...

bioformats

365
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238
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Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Publ...

histolab

342
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53
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Library for Digital Pathology Image Processing

tcga_segmentation

113
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34
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Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024

Patch-GCN

103
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29
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Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021

raccoon

46
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10
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Raccoon is a NoSQL-based medical image archive for managing the DICOM images.

bluelight

103
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40
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a browser-based DICOM viewer

wsi-preprocessing

40
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13
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Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning

PFA-ScanNet

22
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5
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PFA-ScanNet: Pyramidal Feature Aggregation With Synergistic Learning for Breast Cancer Metastasis Analysis (Architecture Only Pytorch Implementation).