umls topic
List
umls repositories
MedCAT
412
Stars
97
Forks
Watchers
Medical Concept Annotation Tool
sytora
167
Stars
90
Forks
Watchers
A sophisticated smart symptom search engine
QuickUMLS
354
Stars
93
Forks
Watchers
System for Medical Concept Extraction and Linking
trove
68
Stars
21
Forks
Watchers
Weakly supervised medical named entity classification
CogStack-SemEHR
87
Stars
19
Forks
Watchers
Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research
MedCATtrainer
66
Stars
31
Forks
Watchers
A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
medical-ner
20
Stars
4
Forks
Watchers
:hospital: Clinical NER with UMLS lookup :hospital:
metamaplite
54
Stars
14
Forks
Watchers
A near real-time named-entity recognizer
CODER
68
Stars
5
Forks
Watchers
CODER: Knowledge infused cross-lingual medical term embedding for term normalization. [JBI, ACL-BioNLP 2022]